- Predicted Gene MLOC_52430
MLOC_52430 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.62369 | 2.90147 | 3.00951 | 2.88109 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.8671 | 11.9639 | 12.1718 | 9.43731 |
| INF1 | Young developing inflorescences (5mm) | 3.06264 | 4.07242 | 3.62718 | 2.64515 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.72163 | 3.21536 | 5.23658 | 3.76519 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.44113 | 4.38187 | 5.02813 | 4.5948 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.26279 | 7.79347 | 7.92074 | 23.2897 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.07988 | 5.10044 | 4.91594 | 4.25834 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.10593 | 3.90049 | 5.02338 | 9.21116 |
CDS Structure of MLOC_52430
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52430.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g38870.2 |
+1 |
1e-47 |
162 |
92/157 (59%) |
13111.m03824 protein helix-loop-helix DNA-binding domain containing protein, expressed |
| TAIR PP10 | None | - | - | - | - | - |