- Predicted Gene MLOC_52423
MLOC_52423 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.79911 | 6.07084 | 6.21666 | 5.24709 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.4303 | 6.11605 | 2.68455 | 5.43166 |
| INF1 | Young developing inflorescences (5mm) | 15.5061 | 13.0479 | 16.4904 | 11.2284 |
| INF2 | Developing inflorescences (1-1.5 cm) | 32.5633 | 32.7748 | 33.1148 | 32.2989 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.7028 | 7.61491 | 8.33819 | 8.04587 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.84671 | 5.43969 | 8.56436 | 18.4224 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.9105 | 22.689 | 18.6997 | 16.9322 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.8977 | 10.3508 | 11.7528 | 22.5894 |
CDS Structure of MLOC_52423
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52423.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g15310.3 |
-1 |
6e-27 |
102 |
47/58 (81%) |
13102.m01709 protein RNA recognition motif containing protein, expressed |
| TAIR PP10 |
AT3G55460.1 |
-1 |
1e-18 |
80 |
38/55 (69%) |
| Symbols: SCL30, At-SCL30 | SC35-like splicing factor 30 | chr3:20561024-20563502 FORWARD LENGTH=262 |