- Predicted Gene MLOC_52403
MLOC_52403 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 50.7357 | 37.5932 | 38.5681 | 39.3364 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 40.1075 | 26.1709 | 38.7772 | 26.637 |
| INF1 | Young developing inflorescences (5mm) | 12.0085 | 15.7233 | 15.759 | 12.0162 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.4165 | 16.078 | 14.3399 | 15.9739 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 102.433 | 46.0019 | 38.6324 | 55.8615 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 55.1667 | 102.164 | 94.3699 | 255.329 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.92 | 13.4962 | 10.3339 | 11.2865 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.89051 | 0.858834 | 0.601138 | 1.9715 |
CDS Structure of MLOC_52403
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52403.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g07780.1 |
-2 |
5e-126 |
369 |
193/221 (87%) |
13106.m00810 protein vesicle-associated membrane protein, putative, expressed |
| TAIR PP10 |
AT4G32150.1 |
-2 |
2e-98 |
297 |
155/220 (70%) |
| Symbols: VAMP711, ATVAMP711 | vesicle-associated membrane protein 711 | chr4:15526407-15527651 REVERSE LENGTH=219 |