MLOC_52397 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.8425911.919111.72269.50322
LEAShoots from the seedlings (10 cm shoot stage)44.723556.283570.91245.6369
INF1Young developing inflorescences (5mm)25.874230.633628.337721.3599
INF2Developing inflorescences (1-1.5 cm)13.140215.67914.054114.2489
ROORoots from the seedlings (10 cm shoot stage)27.75333.265323.462334.9954
NODDeveloping tillers at six leaf stage, 3rd internode24.7526.619128.041484.5769
CAR5Developing grain, bracts removed (5 DPA)6.404795.862145.919835.3054
CAR15Developing grain, bracts removed (15 DPA)3.829524.123663.939197.96963



CDS Structure of MLOC_52397






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250130.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250130.1CUST_18796_PI427708080NoneNoneNone
MLOC_52397.2NoneAvailableAvailablecontig_37501 (Mapped)
MLOC_60098.1NoneAvailableNonecontig_44190 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----