MLOC_52334 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.133614.974517.38170
LEAShoots from the seedlings (10 cm shoot stage)13.692711.81212.05460
INF1Young developing inflorescences (5mm)11.863116.856724.32530
INF2Developing inflorescences (1-1.5 cm)15.093421.885413.63750
ROORoots from the seedlings (10 cm shoot stage)18.119924.018220.06810
NODDeveloping tillers at six leaf stage, 3rd internode17.405125.802126.1750
CAR5Developing grain, bracts removed (5 DPA)17.571818.615216.93380
CAR15Developing grain, bracts removed (15 DPA)22.499924.028919.90530



CDS Structure of MLOC_52334






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354259
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354259CUST_23673_PI427708080NoneNoneNone
MLOC_23193.1NoneAvailableNonecontig_1618967 (Mapped)
MLOC_28375.1NoneAvailableNonecontig_191221 (Mapped)
MLOC_28732.2NoneAvailableNonecontig_194396 (Mapped)
MLOC_32164.1NoneAvailableNonecontig_225815 (Not mapped)
MLOC_41546.1NoneAvailableNonecontig_2594095 (Not mapped)
MLOC_52334.1NoneAvailableNonecontig_374500 (Mapped)
MLOC_74006.1NoneAvailableAvailablecontig_6492 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----