MLOC_52319 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.339447.127489.057036.18154
LEAShoots from the seedlings (10 cm shoot stage)6.4227411.385710.2346.01913
INF1Young developing inflorescences (5mm)2.410342.641832.140571.55528
INF2Developing inflorescences (1-1.5 cm)1.333643.886781.69982.25574
ROORoots from the seedlings (10 cm shoot stage)2.499686.154044.972665.17925
NODDeveloping tillers at six leaf stage, 3rd internode12.83410.625412.947128.2043
CAR5Developing grain, bracts removed (5 DPA)1.36443.162962.262821.92738
CAR15Developing grain, bracts removed (15 DPA)00.57807101.03367



CDS Structure of MLOC_52319






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52319.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52319.1CUST_12708_PI427708083AvailableAvailablecontig_374398 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g39560.2 -3 5e-18 82 36/44 (82%) 13102.m04381 protein non-receptor tyrosine kinase spore lysis A, putative, expressed
TAIR PP10 AT3G59830.1 -3 1e-12 66 27/44 (61%) Integrin-linked protein kinase family | chr3:22103006-22105323 REVERSE LENGTH=477