- Predicted Gene MLOC_52319
MLOC_52319 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.33944 | 7.12748 | 9.05703 | 6.18154 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.42274 | 11.3857 | 10.234 | 6.01913 |
INF1 | Young developing inflorescences (5mm) | 2.41034 | 2.64183 | 2.14057 | 1.55528 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.33364 | 3.88678 | 1.6998 | 2.25574 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.49968 | 6.15404 | 4.97266 | 5.17925 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.834 | 10.6254 | 12.9471 | 28.2043 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.3644 | 3.16296 | 2.26282 | 1.92738 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.578071 | 0 | 1.03367 |
CDS Structure of MLOC_52319
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52319.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g39560.2 |
-3 |
5e-18 |
82 |
36/44 (82%) |
13102.m04381 protein non-receptor tyrosine kinase spore lysis A, putative, expressed |
TAIR PP10 |
AT3G59830.1 |
-3 |
1e-12 |
66 |
27/44 (61%) |
Integrin-linked protein kinase family | chr3:22103006-22105323 REVERSE LENGTH=477 |