MLOC_52291 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.510128.373829.621328.7874
LEAShoots from the seedlings (10 cm shoot stage)26.140617.333417.385318.0615
INF1Young developing inflorescences (5mm)25.736233.3334.755424.1923
INF2Developing inflorescences (1-1.5 cm)24.222825.120426.231527.3578
ROORoots from the seedlings (10 cm shoot stage)11.096920.469316.152723.5989
NODDeveloping tillers at six leaf stage, 3rd internode76.996867.323750.5641226.238
CAR5Developing grain, bracts removed (5 DPA)27.771229.501631.291129.0053
CAR15Developing grain, bracts removed (15 DPA)18.667719.582617.029539.7142



CDS Structure of MLOC_52291






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369948
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369948CUST_21870_PI427708080NoneNoneNone
MLOC_35815.1NoneAvailableNonecontig_2522763 (Mapped)
MLOC_52291.1NoneAvailableAvailablecontig_37421 (Mapped)
MLOC_998.1NoneAvailableNonecontig_10831 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----