MLOC_52290 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.665422.60812.997972.59883
LEAShoots from the seedlings (10 cm shoot stage)5.075094.082796.051483.99667
INF1Young developing inflorescences (5mm)4.34243.621763.714613.07725
INF2Developing inflorescences (1-1.5 cm)3.608863.803183.375863.79371
ROORoots from the seedlings (10 cm shoot stage)1.542331.851321.443291.97466
NODDeveloping tillers at six leaf stage, 3rd internode3.486045.485329.2059117.0415
CAR5Developing grain, bracts removed (5 DPA)3.464543.250543.761573.21716
CAR15Developing grain, bracts removed (15 DPA)6.4137.055554.8768614.5274



CDS Structure of MLOC_52290






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373583
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373583CUST_22518_PI427708080NoneNoneNone
MLOC_52154.2NoneAvailableNonecontig_37322 (Mapped)
MLOC_52290.1NoneAvailableAvailablecontig_37419 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----