- Predicted Gene MLOC_52278
MLOC_52278 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 80.642 | 70.8425 | 57.6983 | 65.9597 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.3685 | 20.0844 | 21.604 | 16.1997 |
| INF1 | Young developing inflorescences (5mm) | 64.3019 | 52.1592 | 41.2046 | 43.9639 |
| INF2 | Developing inflorescences (1-1.5 cm) | 25.1602 | 28.7001 | 27.0292 | 29.8067 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 47.5277 | 59.1721 | 60.9139 | 59.636 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.571531 | 0.493663 | 0.872779 | 1.44505 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.6918 | 36.3878 | 38.9108 | 36.6794 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.9774 | 9.74799 | 5.98223 | 20.232 |
CDS Structure of MLOC_52278
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52278.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g39780.2 |
-2 |
1e-91 |
277 |
145/176 (82%) |
13109.m04000 protein peptidyl-prolyl cis-trans isomerase, putative, expressed |
| TAIR PP10 |
AT3G56070.2 |
-2 |
2e-82 |
253 |
134/169 (79%) |
| Symbols: ROC2 | rotamase cyclophilin 2 | chr3:20806987-20807517 REVERSE LENGTH=176 |