- Predicted Gene MLOC_52277
MLOC_52277 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.9539 | 8.30238 | 7.31717 | 14.2286 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.28323 | 3.0917 | 2.21149 | 2.58694 |
| INF1 | Young developing inflorescences (5mm) | 1.56563 | 2.15037 | 0.96147 | 2.08227 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.217121 | 1.47876 | 2.06661 | 2.35523 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.49262 | 19.5864 | 10.4693 | 19.3292 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 20.2699 | 18.5689 | 6.93215 | 34.5886 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.9524 | 10.4051 | 10.9725 | 15.1386 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.0801 | 1.54149 | 1.688 | 3.90856 |
CDS Structure of MLOC_52277
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52277.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g42880.1 |
+2 |
2e-77 |
246 |
115/136 (85%) |
13101.m04415 protein transferase family protein, putative, expressed |
| TAIR PP10 |
AT3G62160.1 |
+2 |
1e-20 |
92 |
46/128 (36%) |
HXXXD-type acyl-transferase family protein | chr3:23014333-23015808 REVERSE LENGTH=428 |