- Predicted Gene MLOC_52276
MLOC_52276 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.75016 | 1.39771 | 1.28077 | 1.13068 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0.231352 | 0.142105 | 0.409106 | 0.202844 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.161635 | 0.18746 | 0.271466 | 0.195208 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.89786 | 1.09505 | 0.796047 | 1.22274 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0419693 | 0.0422134 | 0.0144101 | 0.122139 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0870663 | 0.0533382 | 0.0668328 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_52276
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52276.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g44940.1 |
+3 |
6e-55 |
184 |
111/187 (59%) |
13108.m04900 protein DUF260 domain containing protein, putative, expressed |
| TAIR PP10 |
AT2G42440.1 |
+3 |
4e-46 |
161 |
88/121 (73%) |
Lateral organ boundaries (LOB) domain family protein | chr2:17668888-17669750 REVERSE LENGTH=244 |