- Predicted Gene MLOC_52274
MLOC_52274 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 60.5436 | 52.9135 | 57.2245 | 51.4374 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.3332 | 14.4761 | 26.4746 | 19.4706 |
| INF1 | Young developing inflorescences (5mm) | 7.21547 | 6.89645 | 8.59571 | 6.38305 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.91254 | 4.53717 | 4.45589 | 4.43564 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 93.2318 | 48.7124 | 49.856 | 53.5023 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 98.9788 | 112.432 | 61.3553 | 233.62 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.1305 | 25.6567 | 22.0899 | 21.8923 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.81008 | 1.92574 | 2.7467 | 6.08094 |
CDS Structure of MLOC_52274
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52274.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g42880.1 |
+1 |
0.0 |
614 |
343/425 (81%) |
13101.m04415 protein transferase family protein, putative, expressed |
| TAIR PP10 |
AT3G62160.1 |
+1 |
6e-72 |
240 |
148/397 (37%) |
HXXXD-type acyl-transferase family protein | chr3:23014333-23015808 REVERSE LENGTH=428 |
