- Predicted Gene MLOC_52271
MLOC_52271 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52271_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52271_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.21207 | 2.20353 | 2.73187 | 2.55576 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.148942 | 0.135222 | 0.387811 | 0.204891 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.019618 | 0 | 0 | 0.0248012 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.74977 | 2.29338 | 4.08294 | 3.39812 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.301226 | 0.264 | 0.949808 | 1.37205 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0224649 | 0 | 0.0344301 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_52271
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52271.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g56990.1 |
-3 |
9e-100 |
313 |
231/448 (52%) |
13104.m05945 protein Myb-like DNA-binding domain containing protein, putative, expressed |
TAIR PP10 |
AT2G01060.1 |
-3 |
9e-51 |
178 |
92/150 (61%) |
myb-like HTH transcriptional regulator family protein | chr2:73456-74902 REVERSE LENGTH=286 |