MLOC_52271 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.212072.203532.731872.55576
LEAShoots from the seedlings (10 cm shoot stage)0.1489420.1352220.3878110.204891
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.019618000.0248012
ROORoots from the seedlings (10 cm shoot stage)4.749772.293384.082943.39812
NODDeveloping tillers at six leaf stage, 3rd internode0.3012260.2640.9498081.37205
CAR5Developing grain, bracts removed (5 DPA)00.022464900.0344301
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_52271






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52271.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364332NoneNoneNoneNone
AK370962NoneNoneNoneNone
MLOC_52271.2CUST_2947_PI427708080AvailableAvailablecontig_37410 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g56990.1 -3 9e-100 313 231/448 (52%) 13104.m05945 protein Myb-like DNA-binding domain containing protein, putative, expressed
TAIR PP10 AT2G01060.1 -3 9e-51 178 92/150 (61%) myb-like HTH transcriptional regulator family protein | chr2:73456-74902 REVERSE LENGTH=286