- Predicted Gene MLOC_52257
MLOC_52257 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52257_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52257_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 193.8 | 151.903 | 159.27 | 180.525 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 84.7083 | 79.1522 | 89.2132 | 75.9058 |
INF1 | Young developing inflorescences (5mm) | 163.401 | 166.723 | 178.962 | 154.083 |
INF2 | Developing inflorescences (1-1.5 cm) | 125.586 | 142.545 | 134.67 | 158.908 |
ROO | Roots from the seedlings (10 cm shoot stage) | 135.727 | 149.676 | 160.156 | 196.886 |
NOD | Developing tillers at six leaf stage, 3rd internode | 130.213 | 94.5098 | 91.6201 | 311.202 |
CAR5 | Developing grain, bracts removed (5 DPA) | 127.501 | 138.858 | 134.665 | 143.058 |
CAR15 | Developing grain, bracts removed (15 DPA) | 32.9459 | 32.4662 | 29.675 | 81.3994 |
CDS Structure of MLOC_52257
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52257.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g08280.2 |
+2 |
3e-164 |
466 |
233/246 (95%) |
13103.m00946 protein peptidase, T1 family, putative, expressed |
TAIR PP10 |
AT2G05840.1 |
+2 |
5e-149 |
426 |
207/246 (84%) |
| Symbols: PAA2 | 20S proteasome subunit PAA2 | chr2:2234226-2236053 FORWARD LENGTH=246 |