- Predicted Gene MLOC_52235
MLOC_52235 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.6304 | 34.4943 | 28.847 | 25.0225 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.1933 | 18.1007 | 15.2773 | 14.9314 |
| INF1 | Young developing inflorescences (5mm) | 21.1819 | 21.5601 | 19.3449 | 15.8065 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.8088 | 16.8598 | 15.1701 | 16.1134 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.95452 | 15.4192 | 10.801 | 16.7096 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.0489 | 12.2843 | 9.06145 | 43.6908 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.8875 | 19.3195 | 20.6895 | 17.9356 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.26029 | 3.63123 | 3.60259 | 7.13853 |
CDS Structure of MLOC_52235
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52235.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g34080.1 |
-2 |
0.0 |
999 |
553/662 (84%) |
13102.m03695 protein myosin, putative, expressed |
| TAIR PP10 |
AT5G43900.1 |
-2 |
0.0 |
667 |
385/663 (58%) |
| Symbols: MYA2, ATMYA2, XI-2, XI-6 | myosin 2 | chr5:17657241-17666653 REVERSE LENGTH=1505 |