MLOC_52234 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.334719.012215.80430
LEAShoots from the seedlings (10 cm shoot stage)21.668313.289421.37890
INF1Young developing inflorescences (5mm)73.821270.959566.50530
INF2Developing inflorescences (1-1.5 cm)94.732687.386779.260
ROORoots from the seedlings (10 cm shoot stage)14.03418.325225.14230
NODDeveloping tillers at six leaf stage, 3rd internode1.121892.6874814.8430
CAR5Developing grain, bracts removed (5 DPA)38.318940.255241.62570
CAR15Developing grain, bracts removed (15 DPA)16.347918.299618.95240



CDS Structure of MLOC_52234






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK376464
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376464CUST_23043_PI427708080NoneNoneNone
MLOC_25191.1NoneAvailableNonecontig_16761 (Not mapped)
MLOC_52234.1NoneAvailableNonecontig_373879 (Mapped)
MLOC_68496.2NoneAvailableAvailablecontig_54876 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----