MLOC_5222 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5222_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5222_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.720897 | 3.40588 | 3.9301 | 3.03718 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.01464 | 4.0429 | 5.29732 | 4.0475 |
INF1 | Young developing inflorescences (5mm) | 7.36978 | 7.33966 | 7.61369 | 6.78407 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.2714 | 10.7552 | 16.7943 | 15.3937 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.52956 | 2.39075 | 3.6121 | 3.18936 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.0764 | 5.61835 | 3.91468 | 14.9496 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.1712 | 8.04264 | 9.47393 | 10.1913 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.35451 | 6.46938 | 9.77295 | 20.9949 |
CDS Structure of MLOC_5222
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5222.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g08640.1 |
-3 |
4e-16 |
73 |
33/57 (58%) |
13107.m00857 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |