MLOC_5222 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7208973.405883.93013.03718
LEAShoots from the seedlings (10 cm shoot stage)5.014644.04295.297324.0475
INF1Young developing inflorescences (5mm)7.369787.339667.613696.78407
INF2Developing inflorescences (1-1.5 cm)13.271410.755216.794315.3937
ROORoots from the seedlings (10 cm shoot stage)2.529562.390753.61213.18936
NODDeveloping tillers at six leaf stage, 3rd internode3.07645.618353.9146814.9496
CAR5Developing grain, bracts removed (5 DPA)11.17128.042649.4739310.1913
CAR15Developing grain, bracts removed (15 DPA)9.354516.469389.7729520.9949



CDS Structure of MLOC_5222






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5222.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5222.1NoneAvailableAvailablecontig_1360292 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g08640.1 -3 4e-16 73 33/57 (58%) 13107.m00857 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----