- Predicted Gene MLOC_52211
MLOC_52211 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.36731 | 4.00819 | 3.81709 | 3.26614 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.3976 | 7.29335 | 8.06868 | 5.87806 |
INF1 | Young developing inflorescences (5mm) | 8.85107 | 11.2021 | 14.061 | 8.65866 |
INF2 | Developing inflorescences (1-1.5 cm) | 27.3918 | 17.7996 | 19.341 | 21.9555 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.65995 | 6.19272 | 5.81927 | 5.98964 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.57221 | 9.54973 | 17.115 | 31.9115 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.4585 | 11.6842 | 9.2688 | 9.94831 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.53922 | 6.02297 | 7.41387 | 13.1374 |
CDS Structure of MLOC_52211
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52211.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g34170.3 |
-1 |
3e-12 |
66 |
32/40 (80%) |
13105.m03548 protein tubulin/FtsZ domain containing protein, putative, expressed |
TAIR PP10 |
AT1G75780.1 |
-1 |
2e-12 |
66 |
32/40 (80%) |
| Symbols: TUB1 | tubulin beta-1 chain | chr1:28451378-28453602 REVERSE LENGTH=447 |