MLOC_52210 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.1053980.1673290.0947357
LEAShoots from the seedlings (10 cm shoot stage)00.3998530.4647130.311069
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.1899620.4273340.3749990.369291
NODDeveloping tillers at six leaf stage, 3rd internode0.506720.2236080.1371130.616454
CAR5Developing grain, bracts removed (5 DPA)3.082343.283272.650752.38826
CAR15Developing grain, bracts removed (15 DPA)0.7845680.9070950.9962221.54797



CDS Structure of MLOC_52210






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52210.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52210.1CUST_7376_PI427708083AvailableAvailablecontig_37375 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g40730.1 -1 8e-38 134 80/170 (47%) 13101.m04173 protein hypothetical protein
TAIR PP10None-----