- Predicted Gene MLOC_52203
MLOC_52203 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52203_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52203_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.13072 | 19.1334 | 17.6897 | 15.1681 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 26.1819 | 24.4997 | 22.1884 | 20.6758 |
INF1 | Young developing inflorescences (5mm) | 40.8232 | 42.9067 | 40.5821 | 32.6447 |
INF2 | Developing inflorescences (1-1.5 cm) | 45.862 | 48.0101 | 42.874 | 48.356 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.02934 | 14.7263 | 11.9466 | 15.9316 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.673 | 18.9168 | 17.8204 | 64.2044 |
CAR5 | Developing grain, bracts removed (5 DPA) | 26.6007 | 25.0391 | 26.9824 | 24.4048 |
CAR15 | Developing grain, bracts removed (15 DPA) | 15.5699 | 15.0049 | 15.053 | 31.8222 |
CDS Structure of MLOC_52203
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52203.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g22900.1 |
+2 |
0.0 |
2102 |
1197/1530 (78%) |
13103.m02769 protein SNF2 family N-terminal domain containing protein, expressed |
TAIR PP10 |
AT3G57300.1 |
+2 |
0.0 |
1471 |
831/1433 (58%) |
| Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21199612-21207635 FORWARD LENGTH=1507 |