MLOC_5218 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.16012 | 0.973336 | 1.34733 | 1.06242 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.48876 | 1.81853 | 1.74454 | 1.85243 |
| INF1 | Young developing inflorescences (5mm) | 0.175186 | 0.392055 | 0.111732 | 0.200882 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.336578 | 0.326043 | 0 | 0.452712 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.98784 | 3.28268 | 2.1271 | 4.18673 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 14.58 | 6.12556 | 1.44944 | 12.0459 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.47725 | 10.1403 | 7.08754 | 8.72661 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.648982 | 1.03053 | 0.116423 | 1.62263 |
CDS Structure of MLOC_5218
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5218.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g02470.1 |
-2 |
4e-35 |
122 |
56/75 (75%) |
13106.m25646 protein ATOZI1, putative, expressed |
| TAIR PP10 |
AT1G01170.2 |
-2 |
2e-32 |
114 |
51/72 (71%) |
Protein of unknown function (DUF1138) | chr1:74105-74443 REVERSE LENGTH=83 |
