- Predicted Gene MLOC_52161
MLOC_52161 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.94961 | 2.45232 | 2.60171 | 2.91258 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.631488 | 0.289115 | 0.363838 | 0.397635 |
| INF1 | Young developing inflorescences (5mm) | 0.0215739 | 0.0245502 | 0 | 0.0242145 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0573316 | 0.0871914 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.3233 | 7.10403 | 9.67855 | 10.263 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.32648 | 0.811217 | 0.112439 | 2.27962 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.05629 | 1.35138 | 0.976292 | 1.31391 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.56046 | 4.25681 | 2.85904 | 11.0014 |
CDS Structure of MLOC_52161
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52161.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g03914.1 |
+1 |
0.0 |
626 |
323/387 (83%) |
13101.m00345 protein cation efflux family protein, putative, expressed |
| TAIR PP10 |
AT1G79520.1 |
+1 |
1e-169 |
488 |
257/386 (67%) |
Cation efflux family protein | chr1:29912369-29914515 REVERSE LENGTH=402 |