MLOC_52153 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains54.08946.143248.841448.8165
LEAShoots from the seedlings (10 cm shoot stage)48.724448.092867.028243.4321
INF1Young developing inflorescences (5mm)3.323243.200914.027923.15681
INF2Developing inflorescences (1-1.5 cm)2.171212.458354.460283.1645
ROORoots from the seedlings (10 cm shoot stage)102.86483.551266.306790.5001
NODDeveloping tillers at six leaf stage, 3rd internode238.904327.46192.9543724.556
CAR5Developing grain, bracts removed (5 DPA)18.264616.583918.968417.5204
CAR15Developing grain, bracts removed (15 DPA)22.872923.054724.048458.7894



CDS Structure of MLOC_52153






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52153.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359833NoneNoneNoneNone
MLOC_52153.1CUST_2935_PI427708080AvailableAvailablecontig_37322 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g48180.1 +1 0.0 841 410/462 (89%) 13103.m05198 protein peptide transporter PTR2, putative, expressed
TAIR PP10 AT5G62680.1 +1 4e-170 516 257/500 (51%) Major facilitator superfamily protein | chr5:25165430-25167822 REVERSE LENGTH=616