- Predicted Gene MLOC_52140
MLOC_52140 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52140_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52140_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.32991 | 3.95522 | 3.76638 | 3.56899 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 44.7594 | 65.931 | 54.431 | 44.2861 |
INF1 | Young developing inflorescences (5mm) | 6.37084 | 7.45196 | 7.51118 | 5.67847 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.56867 | 5.11825 | 5.60001 | 5.71664 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.411503 | 1.558 | 1.69653 | 1.53945 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.77909 | 5.70104 | 7.40319 | 19.5757 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.78633 | 7.0743 | 6.34594 | 6.38168 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.909843 | 0.780355 | 0.848914 | 1.88668 |
CDS Structure of MLOC_52140
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52140.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g19760.2 |
-1 |
0.0 |
913 |
486/636 (76%) |
13103.m02370 protein HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed |
TAIR PP10 |
AT1G56500.1 |
-1 |
0.0 |
877 |
455/634 (72%) |
haloacid dehalogenase-like hydrolase family protein | chr1:21159775-21167092 FORWARD LENGTH=1055 |