MLOC_52123 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.651262.872523.39280
LEAShoots from the seedlings (10 cm shoot stage)1.842483.683094.021340
INF1Young developing inflorescences (5mm)6.298597.048486.526360
INF2Developing inflorescences (1-1.5 cm)9.218418.297687.956670
ROORoots from the seedlings (10 cm shoot stage)3.565384.29915.150540
NODDeveloping tillers at six leaf stage, 3rd internode2.047293.835544.19270
CAR5Developing grain, bracts removed (5 DPA)5.027146.285863.59460
CAR15Developing grain, bracts removed (15 DPA)2.151872.605523.185260



CDS Structure of MLOC_52123






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355877
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355877NoneNoneNoneNone
MLOC_30290.1NoneAvailableNonecontig_208153 (Mapped)
MLOC_41886.1NoneAvailableAvailablecontig_261145 (Not mapped)
MLOC_46902.1NoneAvailableNonecontig_297432 (Mapped)
MLOC_47597.1NoneAvailableNonecontig_308729 (Not mapped)
MLOC_52123.1NoneAvailableNonecontig_372973 (Mapped)
MLOC_69488.1NoneAvailableNonecontig_56495 (Mapped)
MLOC_81611.1NoneAvailableNonecontig_97233 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----