- Predicted Gene MLOC_52115
MLOC_52115 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 61.862 | 50.3144 | 54.6416 | 56.3365 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 34.0729 | 6.67242 | 12.2672 | 14.4388 |
| INF1 | Young developing inflorescences (5mm) | 6.50636 | 5.66164 | 5.09722 | 5.2648 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.33714 | 11.3094 | 11.6715 | 12.4899 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 40.2758 | 25.439 | 25.8326 | 31.9536 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 30.8683 | 41.8018 | 0.887087 | 94.3089 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 42.8967 | 45.2117 | 43.4604 | 47.8839 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.37223 | 0.132281 | 0.270722 | 0.666156 |
CDS Structure of MLOC_52115
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52115.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g07450.1 |
-2 |
3e-133 |
398 |
256/373 (69%) |
13103.m00832 protein homeobox associated leucine zipper, putative, expressed |
| TAIR PP10 |
AT1G69780.1 |
-2 |
4e-76 |
246 |
147/277 (53%) |
| Symbols: ATHB13 | Homeobox-leucine zipper protein family | chr1:26259166-26260465 FORWARD LENGTH=294 |