- Predicted Gene MLOC_52111
MLOC_52111 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52111_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52111_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.51033 | 7.15469 | 5.41489 | 6.98332 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.2433 | 67.0202 | 123.505 | 54.3075 |
INF1 | Young developing inflorescences (5mm) | 2.98749 | 3.12546 | 3.98024 | 2.6785 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.41637 | 2.06037 | 2.33217 | 1.98228 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.7391 | 16.1116 | 12.7243 | 18.1524 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.30645 | 1.52732 | 1.20057 | 4.36099 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.726 | 9.55404 | 8.33335 | 8.27382 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.35664 | 2.2817 | 1.91525 | 4.04515 |
CDS Structure of MLOC_52111
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52111.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g07870.1 |
+1 |
1e-60 |
212 |
120/133 (90%) |
13101.m00811 protein ABC transporter family protein, putative, expressed |
TAIR PP10 |
AT3G13090.1 |
+1 |
3e-53 |
190 |
105/130 (81%) |
| Symbols: ATMRP8, ABCC6, MRP8 | multidrug resistance-associated protein 8 | chr3:4203013-4208171 REVERSE LENGTH=1466 |