- Predicted Gene MLOC_52097
MLOC_52097 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.215668 | 0.185681 | 0.247397 | 0.247511 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.340502 | 0.284419 | 0.39492 | 0.313905 |
| INF1 | Young developing inflorescences (5mm) | 0.488339 | 0.706018 | 0.675934 | 0.648626 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.389588 | 0.419516 | 0.188882 | 0.461138 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.274287 | 0.52616 | 0.590757 | 0.688249 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0171622 | 0.139197 | 0.226231 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.596683 | 0.683485 | 0.63851 | 0.764153 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.112821 | 0.156041 | 0.0980795 | 0.38026 |
CDS Structure of MLOC_52097
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52097.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g57940.1 |
+3 |
7e-142 |
420 |
215/308 (70%) |
13104.m06079 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT1G50270.1 |
+3 |
1e-73 |
244 |
150/392 (38%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr1:18622044-18623834 FORWARD LENGTH=596 |