- Predicted Gene MLOC_52084
MLOC_52084 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 23.2342 | 23.2197 | 27.0913 | 21.7969 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.908 | 19.8974 | 27.1006 | 17.0023 |
| INF1 | Young developing inflorescences (5mm) | 16.8072 | 16.2138 | 12.4809 | 11.6814 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.54255 | 3.67988 | 4.28494 | 3.77501 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.638 | 21.2843 | 19.6734 | 22.0489 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.6633 | 15.5247 | 15.3011 | 45.5312 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.30812 | 6.7817 | 6.15578 | 5.99001 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.33358 | 6.97844 | 4.69981 | 14.0888 |
CDS Structure of MLOC_52084
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52084.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g43900.1 |
-1 |
0.0 |
608 |
293/321 (91%) |
13107.m04615 protein protein kinase domain containing protein, expressed |
| TAIR PP10 |
AT1G14000.1 |
-1 |
0.0 |
675 |
321/408 (79%) |
| Symbols: VIK | VH1-interacting kinase | chr1:4797606-4800043 FORWARD LENGTH=438 |