MLOC_52083 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.14274900.0493189
LEAShoots from the seedlings (10 cm shoot stage)000.1139360.0259158
INF1Young developing inflorescences (5mm)0.2960790.07574380.1825840.125789
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.23487200.152439
NODDeveloping tillers at six leaf stage, 3rd internode00.026718600.0554939
CAR5Developing grain, bracts removed (5 DPA)00.06163440.07663980.0345254
CAR15Developing grain, bracts removed (15 DPA)0.5887560.537240.3496760.960248



CDS Structure of MLOC_52083






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52083.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52083.1CUST_12699_PI427708083AvailableAvailablecontig_37276 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g43120.1 +2 9e-15 54 32/87 (37%) 13107.m04530 protein transposon protein, putative, unclassified, expressed
TAIR PP10None-----