- Predicted Gene MLOC_52082
MLOC_52082 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 60.7654 | 39.3 | 42.1295 | 44.9938 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 33.454 | 29.9189 | 40.3938 | 27.6327 |
| INF1 | Young developing inflorescences (5mm) | 19.7044 | 21.9471 | 25.1361 | 19.082 |
| INF2 | Developing inflorescences (1-1.5 cm) | 21.8099 | 23.2848 | 23.883 | 26.0993 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 60.2078 | 48.0597 | 44.1304 | 56.1818 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 32.9215 | 42.3031 | 38.1008 | 121.589 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 67.4273 | 69.6594 | 65.521 | 69.9372 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 28.4983 | 27.7029 | 25.2107 | 67.3084 |
CDS Structure of MLOC_52082
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52082.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g43890.1 |
+1 |
3e-111 |
331 |
168/195 (86%) |
13107.m04614 protein emp24/gp25L/p24 family protein, putative, expressed |
| TAIR PP10 |
AT1G26690.1 |
+1 |
7e-75 |
236 |
120/195 (62%) |
emp24/gp25L/p24 family/GOLD family protein | chr1:9224299-9225682 REVERSE LENGTH=214 |