MLOC_52068 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)15.23640.7530772.378855.48705
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.30273100.470443
ROORoots from the seedlings (10 cm shoot stage)0.4306390.4478600.726375
NODDeveloping tillers at six leaf stage, 3rd internode259.015233.3830.237552533.06
CAR5Developing grain, bracts removed (5 DPA)00.18772700.215871
CAR15Developing grain, bracts removed (15 DPA)1.0369700.2544781.74728



CDS Structure of MLOC_52068






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52068.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52068.1CUST_12697_PI427708083AvailableAvailablecontig_372645 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g43930.1 +1 7e-23 93 42/56 (75%) 13105.m04633 protein O-methyltransferase, putative, expressed
TAIR PP10None-----