- Predicted Gene MLOC_52040
MLOC_52040 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52040_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52040_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 32.0753 | 40.5146 | 36.6338 | 39.8364 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 902.918 | 1656.76 | 1509.38 | 1194.1 |
INF1 | Young developing inflorescences (5mm) | 45.6842 | 39.8634 | 43.705 | 38.9868 |
INF2 | Developing inflorescences (1-1.5 cm) | 108.433 | 37.6888 | 69.4491 | 78.4933 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.05173 | 6.59955 | 16.2992 | 8.9525 |
NOD | Developing tillers at six leaf stage, 3rd internode | 309.209 | 324.511 | 480.239 | 1122.79 |
CAR5 | Developing grain, bracts removed (5 DPA) | 172.317 | 195.42 | 185.241 | 191.235 |
CAR15 | Developing grain, bracts removed (15 DPA) | 34.6015 | 42.4193 | 36.7466 | 93.5835 |
CDS Structure of MLOC_52040
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52040.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g07020.1 |
+1 |
0.0 |
722 |
361/388 (93%) |
13111.m00718 protein fructose-bisphospate aldolase isozyme, putative, expressed |
TAIR PP10 |
AT4G38970.1 |
+1 |
0.0 |
639 |
320/398 (80%) |
| Symbols: FBA2 | fructose-bisphosphate aldolase 2 | chr4:18163714-18165659 REVERSE LENGTH=398 |