- Predicted Gene MLOC_52037
MLOC_52037 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52037_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52037_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 26.4653 | 21.8511 | 21.5182 | 24.6618 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.7444 | 6.08511 | 6.61984 | 6.61754 |
INF1 | Young developing inflorescences (5mm) | 13.2825 | 16.0809 | 14.8641 | 13.6107 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.8082 | 14.2643 | 13.716 | 15.9979 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.0561 | 18.8444 | 16.6738 | 22.7413 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.5536 | 13.5469 | 11.3934 | 42.181 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.3259 | 20.6672 | 18.7595 | 20.9071 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.95169 | 2.32737 | 2.5553 | 6.69779 |
CDS Structure of MLOC_52037
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52037.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g18220.1 |
+3 |
0.0 |
524 |
307/377 (81%) |
13110.m01497 protein GHMP kinases ATP-binding protein, putative, expressed |
TAIR PP10 |
AT5G27450.3 |
+3 |
1e-124 |
377 |
219/374 (59%) |
| Symbols: MK | mevalonate kinase | chr5:9691051-9692975 FORWARD LENGTH=378 |