MLOC_52029 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.301302000.467038
LEAShoots from the seedlings (10 cm shoot stage)0.213084000.210448
INF1Young developing inflorescences (5mm)0.319776000.305497
INF2Developing inflorescences (1-1.5 cm)3.575662.664982.800242.81955
ROORoots from the seedlings (10 cm shoot stage)00.13701200.422626
NODDeveloping tillers at six leaf stage, 3rd internode0.09910030.01755320.1395920.0937413
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.10987600.1584360.237654



CDS Structure of MLOC_52029






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52029.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52029.1CUST_7352_PI427708083AvailableAvailablecontig_372391 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g16130.1 -3 2e-20 88 54/79 (68%) 13108.m01724 protein fiber protein Fb34, putative, expressed
TAIR PP10None-----