- Predicted Gene MLOC_51996
MLOC_51996 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.99696 | 2.00845 | 1.92171 | 2.05053 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.53729 | 3.10785 | 1.96605 | 1.60528 |
| INF1 | Young developing inflorescences (5mm) | 0.0508483 | 0 | 0 | 0.0468308 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.9901 | 10.9034 | 13.6121 | 12.2421 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.5162 | 8.59124 | 22.1355 | 26.0072 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.43371 | 10.3262 | 7.64699 | 8.38257 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.222761 | 0.102545 | 0.0642758 | 0.388268 |
CDS Structure of MLOC_51996
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51996.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g02820.1 |
+3 |
5e-25 |
100 |
43/65 (66%) |
13111.m00217 protein CRP10 - Cysteine-rich family protein precursor, expressed |
| TAIR PP10 |
AT5G01015.1 |
+3 |
2e-13 |
66 |
25/56 (45%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65295.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5335-5769 REVERSE LENGTH=104 |