- Predicted Gene MLOC_51985
MLOC_51985 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 11.3945 | 27.3817 | 25.2789 | 25.8341 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 23.1579 | 6.98244 | 5.37246 | 11.1556 |
INF1 | Young developing inflorescences (5mm) | 60.6389 | 62.0942 | 51.0645 | 53.4665 |
INF2 | Developing inflorescences (1-1.5 cm) | 76.9826 | 80.1258 | 67.3049 | 92.8763 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.98781 | 13.5023 | 10.0817 | 17.9227 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.82892 | 8.59534 | 4.41714 | 32.1151 |
CAR5 | Developing grain, bracts removed (5 DPA) | 55.3533 | 50.9057 | 57.6331 | 60.1858 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.49959 | 6.78036 | 9.1103 | 20.5695 |
CDS Structure of MLOC_51985
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51985.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g41200.1 |
+3 |
0.0 |
2217 |
1216/1595 (76%) |
13112.m04296 protein KIP1, putative, expressed |
TAIR PP10 |
AT1G03080.1 |
+3 |
5e-137 |
471 |
407/1462 (28%) |
kinase interacting (KIP1-like) family protein | chr1:731794-737332 REVERSE LENGTH=1733 |