MLOC_51985 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.394527.381725.278925.8341
LEAShoots from the seedlings (10 cm shoot stage)23.15796.982445.3724611.1556
INF1Young developing inflorescences (5mm)60.638962.094251.064553.4665
INF2Developing inflorescences (1-1.5 cm)76.982680.125867.304992.8763
ROORoots from the seedlings (10 cm shoot stage)4.9878113.502310.081717.9227
NODDeveloping tillers at six leaf stage, 3rd internode6.828928.595344.4171432.1151
CAR5Developing grain, bracts removed (5 DPA)55.353350.905757.633160.1858
CAR15Developing grain, bracts removed (15 DPA)9.499596.780369.110320.5695



CDS Structure of MLOC_51985






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51985.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372717NoneNoneNoneNone
MLOC_51985.1CUST_2909_PI427708080AvailableAvailablecontig_37208 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g41200.1 +3 0.0 2217 1216/1595 (76%) 13112.m04296 protein KIP1, putative, expressed
TAIR PP10 AT1G03080.1 +3 5e-137 471 407/1462 (28%) kinase interacting (KIP1-like) family protein | chr1:731794-737332 REVERSE LENGTH=1733