MLOC_51972 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2323.832491.862683.270
LEAShoots from the seedlings (10 cm shoot stage)1367.16590.377550.8490
INF1Young developing inflorescences (5mm)663.867617.281605.6560
INF2Developing inflorescences (1-1.5 cm)435.294597.101401.8350
ROORoots from the seedlings (10 cm shoot stage)1049.341082.941034.180
NODDeveloping tillers at six leaf stage, 3rd internode1052.73851.796335.3250
CAR5Developing grain, bracts removed (5 DPA)1140.761086.421236.710
CAR15Developing grain, bracts removed (15 DPA)156.775104.211144.8490



CDS Structure of MLOC_51972






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250247.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250247.1CUST_18818_PI427708080NoneNoneNone
MLOC_24649.1NoneAvailableNonecontig_165020 (Mapped)
MLOC_27383.1NoneAvailableNonecontig_182642 (Mapped)
MLOC_32595.1NoneAvailableNonecontig_2301155 (Not mapped)
MLOC_34412.1NoneAvailableNonecontig_2437876 (Not mapped)
MLOC_36225.1NoneAvailableNonecontig_2540357 (Not mapped)
MLOC_36965.2NoneAvailableAvailablecontig_2547568 (Mapped)
MLOC_41474.1NoneAvailableNonecontig_259010 (Mapped)
MLOC_41581.1NoneAvailableNonecontig_2596273 (Not mapped)
MLOC_51972.1NoneAvailableNonecontig_371952 (Not mapped)
MLOC_5620.1NoneAvailableNonecontig_1364635 (Not mapped)
MLOC_78155.1NoneAvailableNonecontig_789266 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----