- Predicted Gene MLOC_51938
MLOC_51938 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_51938_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_51938_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.8831 | 2.04871 | 2.46015 | 2.22895 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.67471 | 13.4738 | 4.4281 | 7.24184 |
INF1 | Young developing inflorescences (5mm) | 0.343153 | 0.325202 | 0.199359 | 0.260322 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.509997 | 0.471166 | 0.448731 | 0.536581 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.0567 | 3.69721 | 1.65701 | 4.11136 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.37733 | 1.85721 | 2.33986 | 6.30297 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.84077 | 1.89448 | 2.54801 | 2.09445 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.232083 | 0.439874 | 0.291018 | 0.779883 |
CDS Structure of MLOC_51938
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51938.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g16090.1 |
-3 |
0.0 |
872 |
426/508 (84%) |
13103.m01902 protein LIM domain-containing protein, putative, expressed |
TAIR PP10 |
AT2G39830.1 |
-3 |
0.0 |
585 |
297/502 (59%) |
| Symbols: DAR2 | DA1-related protein 2 | chr2:16619950-16623658 REVERSE LENGTH=528 |