MLOC_51937 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.20284.382445.728274.73407
LEAShoots from the seedlings (10 cm shoot stage)2.755932.142163.386872.40332
INF1Young developing inflorescences (5mm)8.615728.3917210.25487.74445
INF2Developing inflorescences (1-1.5 cm)9.5907810.08610.003210.6597
ROORoots from the seedlings (10 cm shoot stage)4.566975.882215.331546.90378
NODDeveloping tillers at six leaf stage, 3rd internode0.5582670.7245742.835193.33386
CAR5Developing grain, bracts removed (5 DPA)3.534914.080833.835513.70664
CAR15Developing grain, bracts removed (15 DPA)1.080960.9732760.7506842.3379



CDS Structure of MLOC_51937






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51937.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353974NoneNoneNoneNone
MLOC_51937.1CUST_2898_PI427708080AvailableAvailablecontig_37167 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g16080.1 +2 0.0 535 263/301 (87%) 13103.m01900 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT3G55640.1 +2 1e-139 412 208/288 (72%) Mitochondrial substrate carrier family protein | chr3:20640048-20642411 FORWARD LENGTH=332