- Predicted Gene MLOC_51900
MLOC_51900 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.1976 | 8.95408 | 8.28858 | 7.88668 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.2933 | 2.00904 | 2.44497 | 1.88957 |
INF1 | Young developing inflorescences (5mm) | 11.4922 | 11.9363 | 11.3176 | 9.26094 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.58679 | 5.62826 | 6.59779 | 6.54629 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.81041 | 5.94537 | 8.67042 | 6.38759 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.03646 | 0.143348 | 1.76756 | 1.16591 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.74191 | 6.14742 | 3.12956 | 4.45397 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.402134 | 0.184404 | 0.935772 | 0.961614 |
CDS Structure of MLOC_51900
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51900.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g13720.4 |
+2 |
1e-19 |
83 |
40/44 (91%) |
13101.m01510 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |