MLOC_51897 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.351597.739998.3885410.0923
LEAShoots from the seedlings (10 cm shoot stage)3.819531.712062.14532.25229
INF1Young developing inflorescences (5mm)6.72247.129697.483617.46248
INF2Developing inflorescences (1-1.5 cm)5.894976.179236.615298.26481
ROORoots from the seedlings (10 cm shoot stage)7.084694.593266.273186.88605
NODDeveloping tillers at six leaf stage, 3rd internode5.517563.456173.48489.60361
CAR5Developing grain, bracts removed (5 DPA)6.686026.259376.260277.71412
CAR15Developing grain, bracts removed (15 DPA)1.944111.717751.910985.30985



CDS Structure of MLOC_51897






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51897.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370428NoneNoneNoneNone
MLOC_51897.2CUST_2891_PI427708080AvailableAvailablecontig_37140 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g39930.1 -3 4e-129 386 220/283 (78%) 13109.m04018 protein tyrosine protein kinase domain containing protein, putative, expressed
TAIR PP10 AT3G07070.1 -3 2e-101 314 182/290 (63%) Protein kinase superfamily protein | chr3:2238455-2240074 FORWARD LENGTH=414