MLOC_5188 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.3769 | 24.6257 | 26.2406 | 27.5383 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 26.6759 | 31.5432 | 33.9218 | 26.2953 |
| INF1 | Young developing inflorescences (5mm) | 19.1821 | 18.9628 | 23.1228 | 17.9722 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.5487 | 18.368 | 19.4176 | 21.0906 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 46.6162 | 44.0829 | 37.3056 | 52.8932 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 32.9491 | 38.2223 | 30.7767 | 112.244 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.5986 | 29.6259 | 30.5254 | 30.529 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.6227 | 11.2539 | 10.2055 | 26.4809 |
CDS Structure of MLOC_5188
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5188.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g37560.3 |
+1 |
1e-168 |
491 |
318/385 (83%) |
13101.m03820 protein chaperone protein dnaJ 49, putative, expressed |
| TAIR PP10 |
AT3G57340.2 |
+1 |
2e-85 |
275 |
154/277 (56%) |
Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) | chr3:21219175-21220278 FORWARD LENGTH=367 |
