MLOC_5187 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5187_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5187_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.6606 | 2.51105 | 2.17359 | 2.22708 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.40826 | 1.69866 | 2.52113 | 1.81534 |
INF1 | Young developing inflorescences (5mm) | 3.69798 | 4.24261 | 4.77178 | 2.97589 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.98384 | 3.18818 | 3.60244 | 3.10105 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.59622 | 2.12167 | 3.338 | 2.61591 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.11112 | 8.09656 | 4.03657 | 25.5453 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.29997 | 2.27908 | 3.82032 | 2.31683 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.737577 | 0.337678 | 0.252058 | 1.06633 |
CDS Structure of MLOC_5187
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5187.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g45821.1 |
+1 |
5e-80 |
253 |
134/155 (86%) |
13104.m04596 protein expressed protein |
TAIR PP10 |
AT4G22290.1 |
+1 |
2e-31 |
124 |
69/156 (44%) |
Ubiquitin-specific protease family C19-related protein | chr4:11783199-11785730 REVERSE LENGTH=445 |