MLOC_51843 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4127341.192660.7592140.792259
LEAShoots from the seedlings (10 cm shoot stage)8.6083712.782917.813810.0273
INF1Young developing inflorescences (5mm)0.4199320.2179980.2659380.238956
INF2Developing inflorescences (1-1.5 cm)0.08727540.01374930.2978190.10321
ROORoots from the seedlings (10 cm shoot stage)1.393411.64473.092191.85052
NODDeveloping tillers at six leaf stage, 3rd internode8.3964512.34438.1922834.7446
CAR5Developing grain, bracts removed (5 DPA)1.729771.725641.68281.47277
CAR15Developing grain, bracts removed (15 DPA)0.03807920.0797110.08373030.121177



CDS Structure of MLOC_51843






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51843.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252147.1NoneNoneNoneNone
MLOC_51843.2CUST_18073_PI427708080AvailableAvailablecontig_37039 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g01310.1 +1 0.0 1055 542/816 (66%) 13104.m00042 protein serine/threonine-protein kinase receptor precursor, putative, expressed
TAIR PP10 AT2G19130.1 +1 0.0 575 345/819 (42%) S-locus lectin protein kinase family protein | chr2:8293789-8296275 FORWARD LENGTH=828