MLOC_51837 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.33969.121168.653268.18079
LEAShoots from the seedlings (10 cm shoot stage)12.28268.6408810.59198.21843
INF1Young developing inflorescences (5mm)8.319489.348059.23156.42663
INF2Developing inflorescences (1-1.5 cm)8.827178.810819.64168.52029
ROORoots from the seedlings (10 cm shoot stage)11.036813.5089.8913913.2586
NODDeveloping tillers at six leaf stage, 3rd internode37.035450.88443.4013142.358
CAR5Developing grain, bracts removed (5 DPA)18.433619.35120.208516.0221
CAR15Developing grain, bracts removed (15 DPA)7.535079.092588.9717916.0644



CDS Structure of MLOC_51837






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51837.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360342NoneNoneNoneNone
MLOC_51837.1CUST_257_PI427708083AvailableAvailablecontig_37106 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g36990.1 +3 9e-137 429 199/220 (90%) 13106.m03828 protein phospholipid-transporting ATPase 4, putative, expressed
TAIR PP10 AT1G54280.1 +3 3e-98 323 149/218 (68%) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:20262766-20267293 REVERSE LENGTH=1240