MLOC_51828 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.541928.259698.324066.67408
LEAShoots from the seedlings (10 cm shoot stage)8.320825.033975.658934.9731
INF1Young developing inflorescences (5mm)14.100215.487415.59510.5548
INF2Developing inflorescences (1-1.5 cm)11.961914.015914.08812.234
ROORoots from the seedlings (10 cm shoot stage)3.681347.733996.320986.69116
NODDeveloping tillers at six leaf stage, 3rd internode6.376686.786797.6440919.3974
CAR5Developing grain, bracts removed (5 DPA)7.534388.128088.445946.34411
CAR15Developing grain, bracts removed (15 DPA)3.103443.116573.111765.9128



CDS Structure of MLOC_51828






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51828.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_51828.3CUST_12826_PI427708080AvailableAvailablecontig_37101 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g05670.1 -2 0.0 749 395/480 (82%) 13108.m00561 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT4G38120.1 -2 3e-118 388 227/492 (46%) ARM repeat superfamily protein | chr4:17888668-17896060 REVERSE LENGTH=1165