- Predicted Gene MLOC_51816
MLOC_51816 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_51816_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_51816_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 16.3771 | 14.733 | 13.3092 | 14.0847 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.7095 | 6.3243 | 8.81243 | 8.52774 |
INF1 | Young developing inflorescences (5mm) | 29.4128 | 32.948 | 30.6027 | 25.0869 |
INF2 | Developing inflorescences (1-1.5 cm) | 25.0875 | 29.829 | 33.3956 | 29.9373 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.6225 | 13.7442 | 21.833 | 15.0148 |
NOD | Developing tillers at six leaf stage, 3rd internode | 25.2242 | 27.283 | 19.6326 | 74.7373 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.7365 | 14.5002 | 14.9247 | 12.7562 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.46191 | 2.40834 | 3.01843 | 6.71847 |
CDS Structure of MLOC_51816
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_51816.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g35980.1 |
+1 |
1e-173 |
492 |
230/260 (88%) |
13110.m03247 protein tetraspanin family protein, putative, expressed |
TAIR PP10 |
AT1G63260.2 |
+1 |
7e-130 |
379 |
175/256 (68%) |
| Symbols: TET10 | tetraspanin10 | chr1:23466975-23468945 REVERSE LENGTH=258 |