MLOC_5181 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 62.7725 | 77.2955 | 64.6052 | 73.8349 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 91.941 | 39.068 | 39.1962 | 50.8707 |
| INF1 | Young developing inflorescences (5mm) | 249.088 | 231.597 | 253.162 | 211.649 |
| INF2 | Developing inflorescences (1-1.5 cm) | 348.762 | 278.661 | 303.204 | 341.786 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 47.6637 | 87.7002 | 73.9268 | 104.119 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.30807 | 8.32657 | 25.4849 | 39.5737 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 71.6513 | 67.3741 | 63.6958 | 67.5423 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 46.4153 | 38.4375 | 44.7885 | 101.113 |
CDS Structure of MLOC_5181
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5181.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g09570.1 |
+1 |
0.0 |
1097 |
590/678 (87%) |
13106.m01033 protein nucleolar GTP-binding protein 1, putative, expressed |
| TAIR PP10 |
AT1G50920.1 |
+1 |
0.0 |
946 |
498/678 (73%) |
Nucleolar GTP-binding protein | chr1:18870555-18872570 FORWARD LENGTH=671 |
