MLOC_51792 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.3085510.47279.574999.38567
LEAShoots from the seedlings (10 cm shoot stage)5.120044.63487.257174.483
INF1Young developing inflorescences (5mm)6.070035.693896.729674.89689
INF2Developing inflorescences (1-1.5 cm)4.422815.288725.891895.26538
ROORoots from the seedlings (10 cm shoot stage)11.458614.338310.848114.4219
NODDeveloping tillers at six leaf stage, 3rd internode7.494547.696154.4207621.0085
CAR5Developing grain, bracts removed (5 DPA)3.255352.726082.631622.60909
CAR15Developing grain, bracts removed (15 DPA)1.316881.753391.494573.311



CDS Structure of MLOC_51792






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_51792.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251175.1NoneNoneNoneNone
MLOC_51792.3CUST_18072_PI427708080AvailableAvailablecontig_37039 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38690.1 -3 0.0 534 309/491 (63%) 13109.m03859 protein transporter family protein, putative, expressed
TAIR PP10 AT3G13050.1 -3 5e-171 507 297/483 (61%) Major facilitator superfamily protein | chr3:4176866-4178868 FORWARD LENGTH=500